[Master Index] [Index for Toolbox]

help_preference_list

(Toolbox/help_preference_list.m in BrainStorm 2.0 (Alpha))


Function Synopsis

help_preference_list;

Help Text

HELP_PREFERENCE_LIST - Explain the preferences used by BrainStorm
 function help_preference_list;
Call as a function or type 'help help_preference_list' at the command line

Generate this file using the development tool make_preference_list

AS OF 24-Sep-2003 15:30:18:

 -----------------  BrainStorm  ---------------------

The following Preferences are found in the BrainStorm m-files:

          CurrentData
      DateofAgreement
       DefaultSubject
               Layout
              Studies
         StudySubject
             Subjects
      UserCurrentData
         UserDataBase
              Version
        iUserDataBase

Matlab has the following Preferences stored in Group 'BrainStorm'

        CurrentData: [1x1 struct]  
    DateofAgreement: char    e.g. '18-Sep-2003'
             Layout: [1x1 struct]  
            Studies: [1x1 struct]  
       StudySubject: empty   
           Subjects: [1x1 struct]  
       UserDataBase: [1x3 struct]  
            Version: [1x1 struct]  
      iUserDataBase: [1x1 double]  e.g. 1

Below are details on how each Preference is defined and used in BrainStorm


-----------------  CurrentData  ---------------------

BrainStorm Preference 'CurrentData' is of class struct
 'CurrentData' has the following fields:
         StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
       SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'

 Help for this preference (help_pref_currentdata) is given as:

   Group 'BrainStorm' Preference 'CurrentData'
   Class Structure, array 1 x 1
   Fields
    .StudyFile Relative filename to the folder containing data
    .SubjectFile Relative filename to the folder with subject information
  

 The following BrainStorm m-files 'SET' this preference:

    data_manager.m
    database_manager.m

 The following BrainStorm m-files 'GET' this preference:

    database_manager.m
    dataplot_cb.m
    get_user_directory.m
    startup.m


-----------------  DateofAgreement  ---------------------

BrainStorm Preference 'DateofAgreement' is of class char

 Help for this preference (help_pref_dateofagreement) is given as:

   Group 'BrainStorm' Preference 'DateofAgreement'
   Class character
   String giving the date copyright notice last agreed to
  

 The following BrainStorm m-files 'SET' this preference:

    bst_splashscreen.m

 The following BrainStorm m-files 'GET' this preference:

    startup.m


-----------------  DefaultSubject  ---------------------


 ** BrainStorm Preference 'DefaultSubject' was NOT found in the stored preferences.


 Help for this preference (help_pref_defaultsubject) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:


 The following BrainStorm m-files 'GET' this preference:

    importdata.m


-----------------  Layout  ---------------------

BrainStorm Preference 'Layout' is of class struct
 'Layout' has the following fields:
        DynamicHeight: [1x1 double]  e.g. 0.832713
         DynamicWidth: [1x1 double]  e.g. 0.18395
           MenuMargin: [1x1 double]  e.g. 0.025
        MessageHeight: [1x1 double]  e.g. 0.166636
         MessageWidth: [1x1 double]  e.g. 0.398232
           NameMargin: [1x1 double]  e.g. 0.032
       ScreenPosition: [1x4 double]  
           ScreenSize: [1x4 double]  
           SideMargin: [1x1 double]  e.g. 0.0075
         StaticHeight: [1x1 double]  e.g. 0.166636
          StaticWidth: [1x1 double]  e.g. 0.601768
               allpos: [9x4 double]  
              tilepos: [2x2 cell]  
               winpos: [3x4 double]  

 Help for this preference (help_pref_layout) is given as:

   Group 'BrainStorm' Preference 'Layout'
   Class structure 1 x 1
   Fields
    .DynamicHeight Height of the vertical toolbar on the right 
    .DynamicWidth Width (normalized units)
    .MenuMargin allowance for the filemenu height used in some figs
    .MessageHeight Height of the Message window on the lower left
    .MessageWidth Width
    .NameMargin allowance for the name height used in all windows
    .ScreenPosition
    .ScreenSize
    .SideMargin allowance for thickness of the edging on sides of figures
    .StaticHeight Height of the BrainStorm toolbar at lower right
    .StaticWidth width
    .allpos: [9x4 double]  concatenation of these positions
    .tilepos: [2x2 cell]  the calculated locations of each tile (1,1,1) to (2,2,4)
    .winpos: [3x4 double]
  

 The following BrainStorm m-files 'SET' this preference:

    bst_layout.m

 The following BrainStorm m-files 'GET' this preference:

    bst_layout.m
    bst_static_taskbar.m
    data_manager.m


-----------------  Studies  ---------------------

BrainStorm Preference 'Studies' is of class struct
 'Studies' has the following fields:
         StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
       StudyFolder: char    e.g. 'default_data'
         StudyName: char    e.g. 'Default Data'

 Help for this preference (help_pref_studies) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:

    data_manager.m

 The following BrainStorm m-files 'GET' this preference:

    startup.m
    study_editor.m
    subject_editor.m


-----------------  StudySubject  ---------------------

BrainStorm Preference 'StudySubject' is of class empty

 Help for this preference (help_pref_studysubject) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:


 The following BrainStorm m-files 'GET' this preference:

    startup.m


-----------------  Subjects  ---------------------

BrainStorm Preference 'Subjects' is of class struct
 'Subjects' has the following fields:
              Name: char    e.g. 'Default Spherical Subject'
       SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'

 Help for this preference (help_pref_subjects) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:

    data_manager.m

 The following BrainStorm m-files 'GET' this preference:

    importdata.m
    startup.m
    study_editor.m


-----------------  UserCurrentData  ---------------------


 ** BrainStorm Preference 'UserCurrentData' was NOT found in the stored preferences.


 Help for this preference (help_pref_usercurrentdata) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:

    dataplot_cb.m

 The following BrainStorm m-files 'GET' this preference:

    get_user_directory.m


-----------------  UserDataBase  ---------------------

BrainStorm Preference 'UserDataBase' is of class struct
 'UserDataBase' has the following fields:
        Comment: char    e.g. 'Default Database'
       FILELIST: [1x1 struct]  
        STUDIES: char    e.g. 'C:\BrainStorm_2001\default_database'
       SUBJECTS: char    e.g. 'C:\BrainStorm_2001\default_database'

      Structure 'FILELIST' has the following fields:
            StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
          StudyFolder: char    e.g. 'default_data'
            StudyName: char    e.g. 'Default Data'
              Subject: [1x1 struct]  
                bytes: [1x1 double]  e.g. 720
                 date: char    e.g. '18-Sep-2003 09:35:20'
              display: char    e.g. 'default_data | Default.Data | Default.Spherical.Subject'
                isdir: [1x1 double]  e.g. 0

         Structure 'Subject' has the following fields:
                    Name: char    e.g. 'Default Spherical Subject'
             SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'

 Help for this preference (help_pref_userdatabase) is given as:

   Group 'BrainStorm' Preference 'UserDataBase'
   Class Structure, array 1 x n
   Fields
    .Comment The name of the database
    .SUBJECTS The absolute directory folder where all subject information is kept.
    .STUDIES  The absolute directory folder where all data information is kept.
    .FILELIST The result of BROWSE_STUDY_FOLDER applied to .STUDIES.
  

 The following BrainStorm m-files 'SET' this preference:

    brainstorm_reset.m
    data_manager.m
    database_manager.m
    make_default_database.m
    startup.m
    study_editor.m

 The following BrainStorm m-files 'GET' this preference:

    brainstorm_reset.m
    data_manager.m
    database_manager.m
    get_user_directory.m
    make_default_database.m
    startup.m
    study_editor.m


-----------------  Version  ---------------------

BrainStorm Preference 'Version' is of class struct
 'Version' has the following fields:
          Date: char    e.g. '08-Sep-2003'
          Name: char    e.g. 'BrainStorm Toolbox'
       Release: char    e.g. '(Alpha-Pre)'
       Version: char    e.g. '2.0'

 Help for this preference (help_pref_version) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:

    startup.m

 The following BrainStorm m-files 'GET' this preference:

    bst_static_taskbar.m


-----------------  iUserDataBase  ---------------------

BrainStorm Preference 'iUserDataBase' is of class double

 Help for this preference (help_pref_iuserdatabase) is given as:

   (add help information)

 The following BrainStorm m-files 'SET' this preference:

    brainstorm_reset.m
    data_manager.m
    database_manager.m
    make_default_database.m
    startup.m

 The following BrainStorm m-files 'GET' this preference:

    data_manager.m
    database_manager.m
    get_user_directory.m
    make_default_database.m
    study_editor.m


Listing of function C:\BrainStorm_2001\Toolbox\help_preference_list.m

function help_preference_list;
%HELP_PREFERENCE_LIST - Explain the preferences used by BrainStorm
% function help_preference_list;
%Call as a function or type 'help help_preference_list' at the command line
%
%Generate this file using the development tool make_preference_list
%
%AS OF 24-Sep-2003 15:30:18:
%
% -----------------  BrainStorm  ---------------------
%
%The following Preferences are found in the BrainStorm m-files:
%
%          CurrentData
%      DateofAgreement
%       DefaultSubject
%               Layout
%              Studies
%         StudySubject
%             Subjects
%      UserCurrentData
%         UserDataBase
%              Version
%        iUserDataBase
%
%Matlab has the following Preferences stored in Group 'BrainStorm'
%
%        CurrentData: [1x1 struct]  
%    DateofAgreement: char    e.g. '18-Sep-2003'
%             Layout: [1x1 struct]  
%            Studies: [1x1 struct]  
%       StudySubject: empty   
%           Subjects: [1x1 struct]  
%       UserDataBase: [1x3 struct]  
%            Version: [1x1 struct]  
%      iUserDataBase: [1x1 double]  e.g. 1
%
%Below are details on how each Preference is defined and used in BrainStorm
%
%
%-----------------  CurrentData  ---------------------
%
%BrainStorm Preference 'CurrentData' is of class struct
% 'CurrentData' has the following fields:
%         StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
%       SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'
%
% Help for this preference (help_pref_currentdata) is given as:
%
%   Group 'BrainStorm' Preference 'CurrentData'
%   Class Structure, array 1 x 1
%   Fields
%    .StudyFile Relative filename to the folder containing data
%    .SubjectFile Relative filename to the folder with subject information
%  
%
% The following BrainStorm m-files 'SET' this preference:
%
%    data_manager.m
%    database_manager.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    database_manager.m
%    dataplot_cb.m
%    get_user_directory.m
%    startup.m
%
%
%-----------------  DateofAgreement  ---------------------
%
%BrainStorm Preference 'DateofAgreement' is of class char
%
% Help for this preference (help_pref_dateofagreement) is given as:
%
%   Group 'BrainStorm' Preference 'DateofAgreement'
%   Class character
%   String giving the date copyright notice last agreed to
%  
%
% The following BrainStorm m-files 'SET' this preference:
%
%    bst_splashscreen.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    startup.m
%
%
%-----------------  DefaultSubject  ---------------------
%
%
% ** BrainStorm Preference 'DefaultSubject' was NOT found in the stored preferences.
%
%
% Help for this preference (help_pref_defaultsubject) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%
% The following BrainStorm m-files 'GET' this preference:
%
%    importdata.m
%
%
%-----------------  Layout  ---------------------
%
%BrainStorm Preference 'Layout' is of class struct
% 'Layout' has the following fields:
%        DynamicHeight: [1x1 double]  e.g. 0.832713
%         DynamicWidth: [1x1 double]  e.g. 0.18395
%           MenuMargin: [1x1 double]  e.g. 0.025
%        MessageHeight: [1x1 double]  e.g. 0.166636
%         MessageWidth: [1x1 double]  e.g. 0.398232
%           NameMargin: [1x1 double]  e.g. 0.032
%       ScreenPosition: [1x4 double]  
%           ScreenSize: [1x4 double]  
%           SideMargin: [1x1 double]  e.g. 0.0075
%         StaticHeight: [1x1 double]  e.g. 0.166636
%          StaticWidth: [1x1 double]  e.g. 0.601768
%               allpos: [9x4 double]  
%              tilepos: [2x2 cell]  
%               winpos: [3x4 double]  
%
% Help for this preference (help_pref_layout) is given as:
%
%   Group 'BrainStorm' Preference 'Layout'
%   Class structure 1 x 1
%   Fields
%    .DynamicHeight Height of the vertical toolbar on the right 
%    .DynamicWidth Width (normalized units)
%    .MenuMargin allowance for the filemenu height used in some figs
%    .MessageHeight Height of the Message window on the lower left
%    .MessageWidth Width
%    .NameMargin allowance for the name height used in all windows
%    .ScreenPosition
%    .ScreenSize
%    .SideMargin allowance for thickness of the edging on sides of figures
%    .StaticHeight Height of the BrainStorm toolbar at lower right
%    .StaticWidth width
%    .allpos: [9x4 double]  concatenation of these positions
%    .tilepos: [2x2 cell]  the calculated locations of each tile (1,1,1) to (2,2,4)
%    .winpos: [3x4 double]
%  
%
% The following BrainStorm m-files 'SET' this preference:
%
%    bst_layout.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    bst_layout.m
%    bst_static_taskbar.m
%    data_manager.m
%
%
%-----------------  Studies  ---------------------
%
%BrainStorm Preference 'Studies' is of class struct
% 'Studies' has the following fields:
%         StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
%       StudyFolder: char    e.g. 'default_data'
%         StudyName: char    e.g. 'Default Data'
%
% Help for this preference (help_pref_studies) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%    data_manager.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    startup.m
%    study_editor.m
%    subject_editor.m
%
%
%-----------------  StudySubject  ---------------------
%
%BrainStorm Preference 'StudySubject' is of class empty
%
% Help for this preference (help_pref_studysubject) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%
% The following BrainStorm m-files 'GET' this preference:
%
%    startup.m
%
%
%-----------------  Subjects  ---------------------
%
%BrainStorm Preference 'Subjects' is of class struct
% 'Subjects' has the following fields:
%              Name: char    e.g. 'Default Spherical Subject'
%       SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'
%
% Help for this preference (help_pref_subjects) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%    data_manager.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    importdata.m
%    startup.m
%    study_editor.m
%
%
%-----------------  UserCurrentData  ---------------------
%
%
% ** BrainStorm Preference 'UserCurrentData' was NOT found in the stored preferences.
%
%
% Help for this preference (help_pref_usercurrentdata) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%    dataplot_cb.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    get_user_directory.m
%
%
%-----------------  UserDataBase  ---------------------
%
%BrainStorm Preference 'UserDataBase' is of class struct
% 'UserDataBase' has the following fields:
%        Comment: char    e.g. 'Default Database'
%       FILELIST: [1x1 struct]  
%        STUDIES: char    e.g. 'C:\BrainStorm_2001\default_database'
%       SUBJECTS: char    e.g. 'C:\BrainStorm_2001\default_database'
%
%      Structure 'FILELIST' has the following fields:
%            StudyFile: char    e.g. 'default_data\sphere_brainstormstudy.mat'
%          StudyFolder: char    e.g. 'default_data'
%            StudyName: char    e.g. 'Default Data'
%              Subject: [1x1 struct]  
%                bytes: [1x1 double]  e.g. 720
%                 date: char    e.g. '18-Sep-2003 09:35:20'
%              display: char    e.g. 'default_data | Default.Data | Default.Spherical.Subject'
%                isdir: [1x1 double]  e.g. 0
%
%         Structure 'Subject' has the following fields:
%                    Name: char    e.g. 'Default Spherical Subject'
%             SubjectFile: char    e.g. 'default_subject\sphere_brainstormsubject.mat'
%
% Help for this preference (help_pref_userdatabase) is given as:
%
%   Group 'BrainStorm' Preference 'UserDataBase'
%   Class Structure, array 1 x n
%   Fields
%    .Comment The name of the database
%    .SUBJECTS The absolute directory folder where all subject information is kept.
%    .STUDIES  The absolute directory folder where all data information is kept.
%    .FILELIST The result of BROWSE_STUDY_FOLDER applied to .STUDIES.
%  
%
% The following BrainStorm m-files 'SET' this preference:
%
%    brainstorm_reset.m
%    data_manager.m
%    database_manager.m
%    make_default_database.m
%    startup.m
%    study_editor.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    brainstorm_reset.m
%    data_manager.m
%    database_manager.m
%    get_user_directory.m
%    make_default_database.m
%    startup.m
%    study_editor.m
%
%
%-----------------  Version  ---------------------
%
%BrainStorm Preference 'Version' is of class struct
% 'Version' has the following fields:
%          Date: char    e.g. '08-Sep-2003'
%          Name: char    e.g. 'BrainStorm Toolbox'
%       Release: char    e.g. '(Alpha-Pre)'
%       Version: char    e.g. '2.0'
%
% Help for this preference (help_pref_version) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%    startup.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    bst_static_taskbar.m
%
%
%-----------------  iUserDataBase  ---------------------
%
%BrainStorm Preference 'iUserDataBase' is of class double
%
% Help for this preference (help_pref_iuserdatabase) is given as:
%
%   (add help information)
%
% The following BrainStorm m-files 'SET' this preference:
%
%    brainstorm_reset.m
%    data_manager.m
%    database_manager.m
%    make_default_database.m
%    startup.m
%
% The following BrainStorm m-files 'GET' this preference:
%
%    data_manager.m
%    database_manager.m
%    get_user_directory.m
%    make_default_database.m
%    study_editor.m
%

%<autobegin> ---------------------- 26-May-2004 11:30:39 -----------------------
% --------- Automatically Generated Comments Block Using AUTO_COMMENTS ---------
%
% CATEGORY: Help
%
% At Check-in: $Author: Mosher $  $Revision: 7 $  $Date: 5/26/04 9:59a $
%
% This software is part of BrainStorm Toolbox Version 2.0 (Alpha) 24-May-2004
% 
% Principal Investigators and Developers:
% ** Richard M. Leahy, PhD, Signal & Image Processing Institute,
%    University of Southern California, Los Angeles, CA
% ** John C. Mosher, PhD, Biophysics Group,
%    Los Alamos National Laboratory, Los Alamos, NM
% ** Sylvain Baillet, PhD, Cognitive Neuroscience & Brain Imaging Laboratory,
%    CNRS, Hopital de la Salpetriere, Paris, France
% 
% See BrainStorm website at http://neuroimage.usc.edu for further information.
% 
% Copyright (c) 2004 BrainStorm by the University of Southern California
% This software distributed  under the terms of the GNU General Public License
% as published by the Free Software Foundation. Further details on the GPL
% license can be found at http://www.gnu.org/copyleft/gpl.html .
% 
% FOR RESEARCH PURPOSES ONLY. THE SOFTWARE IS PROVIDED "AS IS," AND THE
% UNIVERSITY OF SOUTHERN CALIFORNIA AND ITS COLLABORATORS DO NOT MAKE ANY
% WARRANTY, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO WARRANTIES OF
% MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE, NOR DO THEY ASSUME ANY
% LIABILITY OR RESPONSIBILITY FOR THE USE OF THIS SOFTWARE.
%<autoend> ------------------------ 26-May-2004 11:30:39 -----------------------



% CATEGORY: Help

helptext = help(mfilename);

helpwin(mfilename);

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